Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015842995.1_cds_XP_016508578.1_21582
CDS Infomation

[gene=LOC107826142] [db_xref=GeneID:107826142] [protein=polygalacturonase-like] [protein_id=XP_016508578.1] [location=complement(join(46960..47178,47558..47786,47870..48159,48509..48955))] [gbkey=CDS]
Sequence

ATGTTGAGCAAAATGAGTCCCTTAGCAATTTTCCTAATTCTCTTCATCTTCCTTTTCAAC
TTATCATCATCAGCAAGTACTATGTACAATGTCCAAAATTTTGGAGCCAAATCCAATGGA
AAAACTGATTCATCAAAAGCATTTCTGAGTGCATGGGCTGCAGCCTGTGCTTCTACTAGC
CCGGCCACTATTTACGTGCCACGTGGAAGTTACTTGATTCGTAATGCATACTTTTATGGC
CAAACATGCAAGAGCAAGGCTATTACTATACGTATTGATGGCACTCTCTTAGCTCCCTCT
GATTATAATGTAATTGGAAATGCTGGAAATTGGATCATATTCGAAAAAGTTAAAGGTGTT
TCCATCTATGGTGGAACCTTTGATGGTCAAGGTGCTGCTCTTTGGGCTTGCAAAACCTCC
GGCAAGAATTGTCCTGAAGGCACTACGGCATTGGCCTTTTACAACTCGAACAACATCACA
ATCAATGGAGTAACTGCAAAAAATAGCCAAATGTTTCACATTTTGGTAGATGGATGCAAA
AACGTGAAGCTACAAGGAGTAAATGTCTCAGCTCCAGGAAATAGCCCTAACACCGATGGA
ATTCACGTACAATTATCGATAGGAGTCAGTATTATGAACTCTCATATTGGTACTGGAGAT
GATTGTATCTCAATTGGCCCTGGAAATTCTAACTTATGGATTGAAGGCATTGCTTGTGGC
CCTGGTCATGGAATCAGCATTGGAAGCTTAGGTTGGAAAGTACAAGAGCCAGGAGTCCAA
AATGTAACAATTAAGAGTGTTACATTCACTGGAACAGAGAATGGTGTGAGAGTGAAAACT
TGGGCAAGGCCTAGCAATGGATTTGTTAGAGGTGTTCGCTTTCAGCATATACTTATGACT
GATGTTCAAAATCCTATTATTATTGACCAAAATTACTGCCCTAATCATGAAAATTGTCCT
CATCAGGGATCAGGCGTAAAGATAAGTGATATAACGTATCAAGACATACATGGAACATCA
GCTACAGAAGTTGGAGTGAAATTTGATTGTAGCAAAGTAAATCCATGCAGTGGAATAAGA
CTTGAAAATGTGAATCTAAGTTACAAAAATCATCCAGCTGAAGCTACATGTGTTAATGCT
GGAGGAAGAGCGTCTGGTTTAGAACAACCTACTAGTTGTTTATAA

Peptide Sequence

PEP ID

XP_016508578.1
PEP Infomation

PREDICTED: polygalacturonase-like [Nicotiana tabacum]
Sequence

MLSKMSPLAIFLILFIFLFNLSSSASTMYNVQNFGAKSNGKTDSSKAFLSAWAAACASTS
PATIYVPRGSYLIRNAYFYGQTCKSKAITIRIDGTLLAPSDYNVIGNAGNWIIFEKVKGV
SIYGGTFDGQGAALWACKTSGKNCPEGTTALAFYNSNNITINGVTAKNSQMFHILVDGCK
NVKLQGVNVSAPGNSPNTDGIHVQLSIGVSIMNSHIGTGDDCISIGPGNSNLWIEGIACG
PGHGISIGSLGWKVQEPGVQNVTIKSVTFTGTENGVRVKTWARPSNGFVRGVRFQHILMT
DVQNPIIIDQNYCPNHENCPHQGSGVKISDITYQDIHGTSATEVGVKFDCSKVNPCSGIR
LENVNLSYKNHPAEATCVNAGGRASGLEQPTSCL

Transcript Sequence

Gene sequence data has not been registered.